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Integration of genomic, phenomic, and environmental data for georeferenced plants


Long-lived and sessile plant species serve as ideal models to assess population structure and adaptation to the environment. Despite the availability of comprehensive data, the researchers who study them are challenged to integrate data describing genotype, phenotype, and the environment. Towards this goal, the web application CartograTree (now known as CartograPlant), was designed and implemented as an open repository and open-source analytic web-based framework for all three.

Browse or search CartograPlant here
Submit data for analysis
Detailed documentation, tutorials and resources

Current Data Submission Leads!

Place
Name
Submissions
Trees
Country
1
Charles Demurjian
99
92664
United States
2
Isaac McEvoy
24
11805
United States
3
Barnaly Pande
6
4691
United States
4
Stephen Duncanson
4
1110
United States
5
Emily Strickland
2
808
United States

2021 Competition

Submit your studies today! Competition ends July 26th 2021!
Prize 1
CartograPlant travel mug, TreeGenes portable charger, magnets, stickers, bag, and an opportunity to talk with the developers about new features.
Prize 2
CartograPlant travel mug, stickers, pen, and bag.
Prize 3
CartograPlant travel mug, stickers, pen, and bag
All participants
CartograPlant stickers and magnet.
CartograPlant Dashboard
Plants

8,310,181

Species

255

Genera

235

Countries

43

Studies

154

Genotypes

25,839,892

Phenotypes

1,146,350

Genomic evidence of introgression and adaptation in a model subtropical tree species, Eucalyptus grandis, Range-wide assessment of a SNP panel for individualization and geolocalization of bigleaf maple (Acer macrophyllum Pursh), Diversity, genetic structure, and population genomics of the tropical tree Centrolobium tomentosum in remnant and restored Atlantic forests, Contrasting Patterns of Population History and Seed-mediated Gene Flow in Two Endemic Costa Rican Oak Species

BIEN

Plants 8,191,637 Species 65
Genera 29

TREESNAP

Plants 8,841 Species 130
Genera 51 Phenotypes 62,074
Charles Demurjian with 92664 plants
Isaac McEvoy with 11805 plants
Barnaly Pande with 4691 plants
Stephen Duncanson with 1110 plants
Emily Strickland with 808 plants
Quercus alba
Betula pendula
Vochysia guianensis
Vochysia duquei
Saved sessions
8
815
Metrosideros waialealae var. fauriei
Metrosideros waialealae var. waialealae
Metrosideros polymorpha var. pumila
Metrosideros polymorpha var. polymorpha
N/A