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CartograPlant
Integration of genomic, phenomic, and environmental data for georeferenced plants


Long-lived and sessile plant species serve as ideal models to assess population structure and adaptation to the environment. Despite the availability of comprehensive data, the researchers who study them are challenged to integrate data describing genotype, phenotype, and the environment. Towards this goal, the web application CartograTree (now known as CartograPlant), was designed and implemented as an open repository and open-source analytic web-based framework for all three.

Browse or search CartograPlant here
Detailed documentation, tutorials and resources

It's easy to submit data for analysis in CartograPlant, visit the links below

Submit PopGen Studies

Current Data Submission Leads!

Place
Name
Submissions
Trees
Country
1
Charles Demurjian
96
92575
United States
2
Isaac McEvoy
21
10665
United States
3
Barbara Fussi
1
598
Germany
4
ntoroke@gwdg.de
1
550
Kyrgyzstan
5
Rhiannon Peery
1
64
Canada

2020 Competition

This competition is running through August 14th 2020!

1st Prize: Registration to a virtual conference or workshop of your choice (up to US $350!)

2nd Prize: Registration to a virtual conference or workshop of your choice (up to US $250!)

3rd Prize: Registration to a virtual conference or workshop of your choice (up to US $150!)

4th Prize: CartograPlant Schwag!

Data submission of georeferenced plant studies will be accepted through August 14th! We will award based on total number of studies as well as total georeferenced plants. Submit your data HERE.

2019 Competition Winners

Congratulations to our winners!
  • Winner 1 - Mengmeng Lu
  • Winner 2 - Rhiannon Peery
CartograPlant Statistics
Plants119268
Species194
Genera58
Countries43
Studies141
Genotypes15,929,046
Phenotypes532,698
TREESNAP Statistics
Plants5411
Species81
Genera43
Phenotypes40101

BIEN Statistics
Plants8191637
Species65
Genera29
Phenotypes0

Recently in CartograPlant

Project Members

Member Institution Position
Jill Wegrzyn University of Connecticut Principal Investigator
Nic Herndon University of Connecticut Co-Principal Investigator
Meg Staton University of Tennessee Co-Principal Investigator
Irene Cobo University of Connecticut Postdoctoral Scholar
Risharde Ramnath Dove Technologies Lead Developer
Peter Richter University of Connecticut Developer
Emily Grau University of Connecticut Lead Database Administrator
Charlie Demurjian University of Connecticut Curator
Isaac McEvoy University of Connecticut Curator

Project Alumni

Member Institution Position
Damian Gessler Semantic Options, LLC Advisory member
Taylor Falk University of Connecticut Bioinformatics Developer
Ronald Santos University of Connecticut Programmer