TreeGenes curates genomic and phenomic information for 2058 species representing 199 genus and 16 orders. From this section, you can search for your species of interest or browse below. The data associated with each species is generated from the literature, NCBI Genbank, PLAZA, as well as direct user submissions. In general, species are included because we have at least one piece of genomic or phenomic information associated with them. If you would like to request a new species is added, please submit a request here.

Species
Carica papaya
Common Name
Papaya
TreeGenes Code
Capa
GBIF
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POTWO
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Summary
Genome v0.4 | Total scaffolds 5901 | Total genes N/A
Tools
Genome Details

Details

Name
Value
Total contigs
5901
Total contigs (> 5kb)
3578
Total length
342680090
Total length (> 5kb)
337265271
N50
1182040
L50
79
Alignments Downloads
Gene Index Downloads
Capa.0_4 (GENE BLAST)
Genome Downloads
Genome Index Downloads
Capa.0_4 (BWA)
Capa.0_4 (GENOME BLAST)
Capa.0_4 (GMAP)
Capa.0_4 (HISAT2)
Capa.0_4 (HISAT2 ANNOTATION)
Protein Index Downloads