TreeGenes curates genomic and phenomic information for 2155 species representing 227 genus and 16 orders. From this section, you can search for your species of interest or browse below. The data associated with each species is generated from the literature, NCBI Genbank, PLAZA, as well as direct user submissions. In general, species are included because we have at least one piece of genomic or phenomic information associated with them. If you would like to request a new species is added, please submit a request here.

Species
Fagus sylvatica
Common Name
European beech
TreeGenes Code
Fasy
Lineages
Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Fagus
GBIF
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POTWO
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Bioproject Records
Biosample Records
Summary
Genome v1.0 | Total scaffolds 6491 | Total genes N/A
Tools
Genome Details

Details

Name
Value
Total contigs
6491
Total contigs (> 5kb)
6470
Total length
542302265
Total length (> 5kb)
542230755
N50
145397
L50
983
Genome Downloads
Gene Index Downloads
Fasy.1_0 (GENE BLAST)
Genome Downloads
Genome Index Downloads
Fasy.1_0 (BWA)
Fasy.1_0 (GENOME BLAST)
Fasy.1_0 (GMAP)
Fasy.1_0 (HISAT2)
Protein Index Downloads
Tools
NCBI EST
10116 ESTs | Download EST FASTA
NCBI TSA
131668 TSAs | Download TSA FASTA
TreeGenes Unigene
Download UniGene FASTA
Latest publications associated with Fagus sylvatica
Full list
TreeGenes PopGen Studies
Get more TPPS details for Fagus sylvatica

StudyAuthorTreesCartogratree
TGDR040Finkeldey et al (2015) 1405 trees Display in CartograTree
TGDR062Seifert et al (2016) 600 trees Display in CartograTree
TGDR069Hrivnák et al (2017) 870 trees Display in CartograTree
TGDR069Hrivnák et al (2017) 870 trees Display in CartograTree
TGDR330Leonardi et al (2012) 856 trees Display in CartograTree

[View all TPPS submissions]