TreeGenes curates genomic and phenomic information for 2135 species representing 224 genus and 16 orders. From this section, you can search for your species of interest or browse below. The data associated with each species is generated from the literature, NCBI Genbank, PLAZA, as well as direct user submissions. In general, species are included because we have at least one piece of genomic or phenomic information associated with them. If you would like to request a new species is added, please submit a request here.

Species
Juglans cinerea
Common Name
Butternut
TreeGenes Code
Juci
Lineages
Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
GBIF
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POTWO
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Bioproject Records
Biosample Records
Summary
Genome v1.0 | Total scaffolds 4697138 | Total genes N/A
Tools
Genome Details

Details

Name
Value
Total contigs
4697138
Total contigs (> 5kb)
16957
Total length
886207578
Total length (> 5kb)
157772400
N50
3881
L50
23539
Genome Downloads
Annotation Downloads
Genome Downloads
Genome Index Downloads
Juci.1_0 (BWA)
Juci.1_0 (GENOME BLAST)
Juci.1_0 (GMAP)
Juci.1_0 (HISAT2)
Latest publications associated with Juglans cinerea
Full list
TreeGenes PopGen Studies
Get more TPPS details for Juglans cinerea

StudyAuthorTreesCartogratree
TGDR007Parks et al (2014) 161 trees Display in CartograTree
TGDR046Woeste et al (2015) 928 trees Display in CartograTree
TGDR046Woeste et al (2015) 928 trees Display in CartograTree
TGDR056Boraks et al (2016) 412 trees Display in CartograTree
TGDR056Boraks et al (2016) 412 trees Display in CartograTree

[View all TPPS submissions]