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Tripal Plant PopGen Submissions

This page reflects community submissions associated with published studies. Each submission is associated with a longterm identifier that connects the genotype, phenotype, and/or environmental metrics assessed. These studies represent diversity assessements, association mapping, and landscape genomics. We accept studies with a variety of marker types. We encourage you to submit your study to TreeGenes and utilize the provided accession in your publication. We currently have studies representing 61 species. Studies that have georeferenced accessions associated with them can be queried on CartograTree.

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AccessionTitleSpeciesPopulation SizePhenotypes AssessedPhenotypic MeasuresGenotype Count
TGDR062Identification of associations between SNPs and bud burst timing in European beech (Fagus sylvatica L.)Fagus sylvatica24003960027600
TGDR063Construction of a SNP-Based High-Density Genetic Map Using Genotyping by Sequencing (GBS) and QTL Analysis of Nut Traits in Chinese Chestnut (Castanea mollissima Blume)Castanea mollissima3719970659
TGDR064Construction of a SNP-Based High-Density Genetic Map Using Genotyping by Sequencing (GBS) and QTL Analysis of Nut Traits in Chinese Chestnut (Castanea mollissima Blume)Castanea mollissima3719970659
TGDR065Population isolation results in unexpectedly high differentiation in Carolina hemlock (Tsuga caroliniana), an imperiled southern Appalachian endemic coniferTsuga caroliniana43913170
TGDR066Gene Flow Between Vicariant Tree Species: Insights into Savanna-Forest Evolutionary RelationshipsHymenaea courbaril1421988
TGDR067Gene Flow Between Vicariant Tree Species: Insights Into Savanna-Forest Evolutionary RelationshipsHymenaea stigonocarpa2102940
TGDR068Landscape genetics structure of European sweet chestnut (Castanea sativa Mill): indications for conservation priorities Castanea sativa160816080
TGDR069Variation of cytosine methylation patterns in European beech (Fagus sylvatica L.)Fagus sylvatica13053391523490
TGDR070Effects of logging rotation in a lowland dipterocarp forest on mating system and gene flow in Shorea parvifoliaShorea parvifolia115436928
TGDR071Effects of logging rotation in a lowland dipterocarp forest on mating system and gene flow in Shorea parvifoliaShorea parvifolia115436928
TGDR072Genetic variation in Tertiary relics: the case of eastern-Mediterranean Abies (Pinaceae)Abies alba621116
TGDR073Genetic variation and signatures of natural selection in populations of European beech (Fagus sylvatica L.) along precipitation gradientsFagus sylvatica1053
TGDR081Genetic diversity and structure of natural Juglans regia L. populations in the southern Kyrgyz Republic revealed by nuclear SSR and EST-SSR markersJuglans regia11
TGDR101Data from: Genetic and morphological differentiation in Populus nigra L.: isolation by colonization or isolation by adaptation?Pinus nigra32944122268144
TGDR120Data from: Climate and competition effects on tree growth in Rocky Mountain forestsAbies lasiocarpa92634611144196
TGDR120Data from: Climate and competition effects on tree growth in Rocky Mountain forestsPicea engelmannii92634611144196
TGDR120Data from: Climate and competition effects on tree growth in Rocky Mountain forestsPinus contorta var. latifolia92634611144196
TGDR120Data from: Climate and competition effects on tree growth in Rocky Mountain forestsPinus ponderosa92634611144196
TGDR120Data from: Climate and competition effects on tree growth in Rocky Mountain forestsPseudotsuga menziesii92634611144196
TGDR122Data from: Microsatellite primers for the Pacific Northwest endemic conifer Chamaecyparis lawsoniana (Cupressaceae)Chamaecyparis lawsoniana641408
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